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Aliases : COL9
Description : BBX class-II transcription factor & original description: none
Gene families : OG0001549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001549_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aob_g05245 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G48250 | No alias | B-box type zinc finger protein with CCT domain | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g08497 | No alias | BBX class-II transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g19193 | COL9 | BBX class-II transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g007470.3.1 | Solyc04g007470 | transcription factor (BBX-CO) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g074560.3.1 | Solyc09g074560 | transcription factor (BBX-CO) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010402 | CCT_domain | 542 | 584 |
| No external refs found! |