Aob_g05138 (ATGCN1, GCN1)

Aliases : ATGCN1, GCN1

Description : not classified & original description: none

Gene families : OG0003164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g05138
Cluster	HCCA: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method
Aev_g31359	ATGCN1, GCN1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g03912	ATGCN1, GCN1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06018	ATGCN1, GCN1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_21382	ATGCN1, GCN1	ABC transporter F family member 1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Pnu_g11290	ATGCN1, GCN1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g18687	ATGCN1, GCN1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g07883	ATGCN1, GCN1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e017809_P001	ATGCN1, GCN1,...	ABC transporter F family member 1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e039565_P001	ATGCN1, GCN1,...	ABC transporter F family member 1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	90	245
IPR032781	ABC_tran_Xtn	284	360
IPR003439	ABC_transporter-like_ATP-bd	401	531

External Links

No external refs found!