Aob_g04927

Description : not classified & original description: none

Gene families : OG0006879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006879_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g04927
Cluster	HCCA: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
AT3G19650	No alias	cyclin-related	0.05	OrthoFinder output from all 47 species
Adi_g008340	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.08G042100.1	Ceric.08G042100	not classified & original description: pacid=50638643...	0.05	OrthoFinder output from all 47 species
Dcu_g02494	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g48212	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_20212	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g02375	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016605	No alias	not classified & original description: CDS=374-1336	0.03	OrthoFinder output from all 47 species
Sam_g40859	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g107030.3.1	Solyc01g107030	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Tin_g06725	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e000754_P003	Zm00001e000754	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
CC	GO:0035145	exon-exon junction complex	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
MF	GO:0008318	protein prenyltransferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0018342	protein prenylation	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0097354	prenylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018545	Btz_dom	85	196

External Links

No external refs found!