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  5. Aob_g04443

Aob_g04443


Description : CWF19-type post-transcriptionally regulatory factor & original description: none


Gene families : OG0003680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003680_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g04443
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Aev_g27547 No alias CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Ala_g25904 No alias CWF19-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Ceric.27G019500.1 Ceric.27G019500 CWF19-type post-transcriptionally regulatory factor &... 0.04 OrthoFinder output from all 47 species
Cre17.g741550 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g12707 No alias CWF19-type post-transcriptionally regulatory factor &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042274 ribosomal small subunit biogenesis IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006767 Cwf19-like_C_dom-2 689 786
IPR006768 Cwf19-like_C_dom-1 557 680
No external refs found!