Aob_g04245

Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex & original description: none

Gene families : OG0002880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002880_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g04245

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00225120	evm_27.TU.AmTr_v1...	BTB/POZ domain-containing protein At5g41330...	0.04	OrthoFinder output from all 47 species
Aop_g00633	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene16586.t1	Aspi01Gene16586	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Ceric.38G034700.1	Ceric.38G034700	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Ehy_g01428	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.04	OrthoFinder output from all 47 species
Gb_35424	No alias	BTB/POZ domain-containing protein At3g09030...	0.03	OrthoFinder output from all 47 species
Len_g16227	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
MA_161562g0010	No alias	BTB/POZ domain-containing protein At5g41330...	0.02	OrthoFinder output from all 47 species
MA_201277g0010	No alias	BTB/POZ domain-containing protein At3g09030...	0.04	OrthoFinder output from all 47 species
Spa_g09210	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0051259	protein complex oligomerization	None	Extended
BP	GO:0051260	protein homooligomerization	IEA	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003131	T1-type_BTB	25	109

External Links

No external refs found!