Aob_g04142 (TMO6)

Aliases : TMO6

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g04142

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00049300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT1G28310	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
Adi_g016287	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g050522	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g074898	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g078316	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g106349	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g113482	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g04622	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g01888	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11020	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20563	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g25585	OBP4	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.20G020200.1	CDF1, Ceric.20G020200	transcription factor *(DOF) & original description:...	0.05	OrthoFinder output from all 47 species
Dac_g02618	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g07407	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g25853	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03345	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26661	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01011433001	CDF2	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01019969001	CDF1	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01029943001	CDF3	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
LOC_Os01g15900.1	CDF2, LOC_Os01g15900	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g48290.1	LOC_Os01g48290	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os02g47810.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g16850.1	OBP3, LOC_Os03g16850	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os03g60630.1	LOC_Os03g60630	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os04g58190.1	LOC_Os04g58190	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os07g13260.1	OBP3, LOC_Os07g13260	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os07g32510.1	TMO6, LOC_Os07g32510	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os09g29960.1	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os10g26620.1	CDF1, LOC_Os10g26620	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Len_g10091	TMO6	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g27554	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
MA_175298g0010	CDF2	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Mp2g20790.1	TMO6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Msp_g45088	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g18788	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g61765	DAG1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008681	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=453-2084	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1128	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870	TMO6	transcription factor *(DOF) & original description: CDS=1-1464	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517	CDF3	transcription factor *(DOF) & original description: CDS=154-1659	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023228	No alias	transcription factor *(DOF) & original description: CDS=1-1353	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0279.g027089	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1056	0.05	OrthoFinder output from all 47 species
Solyc02g067230.3.1	CDF2, Solyc02g067230	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc02g076850.2.1	Solyc02g076850	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc02g078620.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc02g088070.3.1	CDF3, Solyc02g088070	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc02g090220.3.1	OBP1, Solyc02g090220	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc04g079570.1.1	OBP1, Solyc04g079570	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc05g007880.4.1	CDF1, Solyc05g007880	Cyclic dof factor 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc06g062520.1.1	ADOF1, DOF1,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g069760.3.1	CDF3, Solyc06g069760	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc11g072500.2.1	TMO6, Solyc11g072500	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e003414_P001	OBP1, Zm00001e003414	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e009303_P001	TMO6, Zm00001e009303	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e017319_P001	CDF2, Zm00001e017319	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e041944_P001	Zm00001e041944	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	21	77

External Links

No external refs found!

Aob_g04142 (TMO6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation