Aob_g03881


Description : component *(eL21) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001239_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g03881
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252940 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
AMTR_s00024p00178920 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT1G09590 No alias Translation protein SH3-like family protein 0.08 OrthoFinder output from all 47 species
AT1G09690 No alias Translation protein SH3-like family protein 0.08 OrthoFinder output from all 47 species
AT1G57660 No alias Translation protein SH3-like family protein 0.07 OrthoFinder output from all 47 species
Adi_g043900 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g043901 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ala_g12117 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g56032 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Als_g62927 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g05077 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Aop_g09546 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Aop_g54674 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.07G094100.1 Ceric.07G094100 component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ceric.10G032200.1 Ceric.10G032200 component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.24G006900.1 Ceric.24G006900 component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000640.5 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder output from all 47 species
Cre06.g278135 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder output from all 47 species
Dac_g13798 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dac_g25425 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g14504 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g14505 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g30991 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g13227 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01001130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01033444001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01033455001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder output from all 47 species
Gb_09077 No alias component RPL21 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os03g04750.1 LOC_Os03g04750 component RPL21 of LSU proteome component 0.11 OrthoFinder output from all 47 species
LOC_Os10g32820.1 LOC_Os10g32820 component RPL21 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Len_g11206 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
MA_186351g0010 No alias component RPL21 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Mp6g01390.1 No alias component RPL21 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Msp_g34423 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Nbi_g06034 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ore_g18005 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pp3c12_9320V3.1 Pp3c12_9320 Translation protein SH3-like family protein 0.05 OrthoFinder output from all 47 species
Pp3c13_2360V3.1 Pp3c13_2360 Translation protein SH3-like family protein 0.05 OrthoFinder output from all 47 species
Pp3c3_5550V3.1 Pp3c3_5550 Translation protein SH3-like family protein 0.06 OrthoFinder output from all 47 species
Pp3c4_21520V3.1 Pp3c4_21520 Translation protein SH3-like family protein 0.07 OrthoFinder output from all 47 species
Sam_g05923 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g15602 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g38886 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Smo170832 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Solyc10g078960.2.1 Solyc10g078960 component RPL21 of LSU proteome component 0.13 OrthoFinder output from all 47 species
Solyc10g080590.2.1 Solyc10g080590 component RPL21 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Spa_g21282 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g21283 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Spa_g29343 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g29344 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g29345 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species Label Co-occ.
Spa_g52174 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g29829 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Zm00001e000341_P001 Zm00001e000341 component RPL21 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Zm00001e004623_P001 Zm00001e004623 component RPL21 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e012727_P001 Zm00001e012727 component RPL21 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Zm00001e038963_P001 Zm00001e038963 component RPL21 of LSU proteome component 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 101
No external refs found!