Aob_g03856 (PSB27)

Aliases : PSB27

Description : protein involved in PS-II assembly *(Psb27) & original description: none

Gene families : OG0006913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006913_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g03856
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AT1G03600	PSB27	photosystem II family protein	0.11	OrthoFinder output from all 47 species
Adi_g017378	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.07	OrthoFinder output from all 47 species
Adi_g017379	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.07	OrthoFinder output from all 47 species
Ala_g03684	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.05	OrthoFinder output from all 47 species
Aop_g01610	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0531.g075849	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.03	OrthoFinder output from all 47 species
Ceric.35G049900.1	PSB27, Ceric.35G049900	protein involved in PS-II assembly *(Psb27) & original...	0.1	OrthoFinder output from all 47 species
Cre05.g243800	PSB27	Photosynthesis.photophosphorylation.photosystem...	0.06	OrthoFinder output from all 47 species
Dac_g02601	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g44405	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.12	OrthoFinder output from all 47 species
Dde_g21620	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.04	OrthoFinder output from all 47 species
Ehy_g19278	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.06	OrthoFinder output from all 47 species
Ehy_g20883	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.05	OrthoFinder output from all 47 species
GSVIVT01030552001	PSB27	Photosynthesis.photophosphorylation.photosystem...	0.05	OrthoFinder output from all 47 species
LOC_Os03g21560.1	PSB27, LOC_Os03g21560	Psb27 protein involved in PS-II assembly	0.1	OrthoFinder output from all 47 species
Len_g11187	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.05	OrthoFinder output from all 47 species
MA_388691g0010	PSB27	Psb27 protein involved in PS-II assembly	0.06	OrthoFinder output from all 47 species
Mp3g19780.1	PSB27	Psb27 protein involved in PS-II assembly	0.08	OrthoFinder output from all 47 species
Msp_g04977	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.07	OrthoFinder output from all 47 species
Nbi_g03338	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.06	OrthoFinder output from all 47 species
Pir_g09257	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.04	OrthoFinder output from all 47 species
Solyc07g054290.1.1	PSB27, Solyc07g054290	Psb27 protein involved in PS-II assembly	0.08	OrthoFinder output from all 47 species
Spa_g04006	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.04	OrthoFinder output from all 47 species
Spa_g04007	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.06	OrthoFinder output from all 47 species
Spa_g05331	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.06	OrthoFinder output from all 47 species
Tin_g00234	PSB27	protein involved in PS-II assembly *(Psb27) & original...	0.07	OrthoFinder output from all 47 species
Zm00001e001572_P001	PSB27, Zm00001e001572	Psb27 protein involved in PS-II assembly	0.09	OrthoFinder output from all 47 species
Zm00001e038249_P001	PSB27, Zm00001e038249	Psb27 protein involved in PS-II assembly	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010206	photosystem II repair	IEA	Interproscan
BP	GO:0010207	photosystem II assembly	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030091	protein repair	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025585	PSII_Pbs27	52	178

External Links

No external refs found!

Aob_g03856 (PSB27)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation