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  5. Aob_g03284

Aob_g03284 (4CL3)


Aliases : 4CL3

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g03284

Target Alias Description ECC score Gene Family Method Actions
AT3G21240 AT4CL2, 4CL2 4-coumarate:CoA ligase 2 0.02 OrthoFinder output from all 47 species
Als_g32388 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Cba_g05200 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
MA_56692g0010 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.01 OrthoFinder output from all 47 species
Mp5g01200.1 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Msp_g09482 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Msp_g40313 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05798 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006230 4CL3 not classified & original description: CDS=1-975 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023264 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Smo110329 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo173133 4CL3 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 OrthoFinder output from all 47 species
Spa_g22789 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 465 540
IPR000873 AMP-dep_Synth/Lig_com 48 456
No external refs found!