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  5. Aob_g02328

Aob_g02328 (ILP1)


Aliases : ILP1

Description : component *(ILP1) of Intron-Lariat Spliceosome complex & original description: none


Gene families : OG0005427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02328

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00252610 ILP1,... Transcriptional repressor ILP1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Ala_g12189 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.03 OrthoFinder output from all 47 species
Aop_g12884 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.04 OrthoFinder output from all 47 species
Ceric.36G009600.1 ILP1, Ceric.36G009600 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.05 OrthoFinder output from all 47 species
Dcu_g34306 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.04 OrthoFinder output from all 47 species
Ehy_g13440 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01011956001 ILP1 Transcriptional repressor ILP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08409 ILP1 component ILP1 of Intron-Lariat Spliceosome complex 0.04 OrthoFinder output from all 47 species
LOC_Os03g63670.2 ILP1, LOC_Os03g63670 component ILP1 of Intron-Lariat Spliceosome complex 0.02 OrthoFinder output from all 47 species
Lfl_g05708 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.04 OrthoFinder output from all 47 species
Mp8g18770.1 ILP1 component ILP1 of Intron-Lariat Spliceosome complex 0.03 OrthoFinder output from all 47 species
Pir_g09775 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.03 OrthoFinder output from all 47 species
Smo161477 ILP1 Transcriptional repressor ILP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc05g009850.4.1 ILP1, Solyc05g009850 component ILP1 of Intron-Lariat Spliceosome complex 0.03 OrthoFinder output from all 47 species
Spa_g05338 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.03 OrthoFinder output from all 47 species
Tin_g07350 ILP1 component *(ILP1) of Intron-Lariat Spliceosome complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e006399_P001 ILP1, Zm00001e006399 component ILP1 of Intron-Lariat Spliceosome complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR022783 GCFC_dom 672 874
No external refs found!