Aliases : TIR1
Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none
Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G26810 | AFB2 | auxin signaling F-box 2 | 0.03 | OrthoFinder output from all 47 species | |
Als_g28117 | AFB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene04141.t1 | AFB2, Aspi01Gene04141 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene13871.t1 | COI1, Aspi01Gene13871 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01003183001 | TIR1 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g18913 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
MA_263909g0010 | COI1 | Coronatine-insensitive protein homolog 1b OS=Oryza... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g02288 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g18805 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g09398 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015908_P001 | Zm00001e015908 | component TIR1/AFB of auxin receptor complex. component... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
No external refs found! |