Aliases : PIP1A, PIP1;1, ATPIP1, PIP1
Description : plasma membrane intrinsic protein *(PIP) & original description: none
Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00227660 | TMP-C, PIP1;4,... | Solute transport.channels.MIP family.plasma membrane... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g24064 | PIP2;1, PIP2, PIP2A | plasma membrane intrinsic protein *(PIP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.09G028200.1 | ATTIP1.3,... | tonoplast intrinsic protein *(TIP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Mp6g11750.1 | ATTIP2;1,... | tonoplast intrinsic protein (TIP) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g16015 | ATTIP2;1,... | tonoplast intrinsic protein *(TIP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g35021 | PIP1A, PIP1;1,... | plasma membrane intrinsic protein *(PIP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g43900 | PIP1;5, PIP1D | plasma membrane intrinsic protein *(PIP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g007770.3.1 | PIP2;1, PIP2,... | plasma membrane intrinsic protein (PIP) | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g084120.2.1 | PIP2;1, PIP2,... | plasma membrane intrinsic protein (PIP) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027152_P001 | TIP4;1, Zm00001e027152 | tonoplast intrinsic protein (TIP) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0015267 | channel activity | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000425 | MIP | 43 | 275 |
No external refs found! |