Aob_g00969 (ASK2, SKP1B)

Aliases : ASK2, SKP1B

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes & original description: none

Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g00969

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00153350	ASK1, ATSKP1,...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
AT1G10230	ASK18, SK18	SKP1-like 18	0.05	OrthoFinder output from all 47 species
AT3G60020	SK5, ASK5	SKP1-like 5	0.03	OrthoFinder output from all 47 species
Adi_g011894	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Als_g04741	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001187.19	ASK2, SKP1B	Protein degradation.peptide tagging.Ubiquitin...	0.01	OrthoFinder output from all 47 species
Dde_g09673	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
LOC_Os10g30200.1	ASK1, ATSKP1,...	target protein binding component SKP1/ASK1 of...	0.05	OrthoFinder output from all 47 species
MA_9824174g0010	ASK2, SKP1B	target protein binding component SKP1/ASK1 of...	0.03	OrthoFinder output from all 47 species
Nbi_g23865	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.04	OrthoFinder output from all 47 species
Zm00001e013384_P001	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0016272	prefoldin complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016073	Skp1_comp_POZ	39	97
IPR016072	Skp1_comp_dimer	143	190

External Links

No external refs found!