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  5. Aob_g00413

Aob_g00413


Description : regulatory protein *(GOT1) of COPII coatomer machinery & original description: none


Gene families : OG0003416 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003416_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g00413
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT3G49420 No alias Got1/Sft2-like vescicle transport protein family 0.01 OrthoFinder output from all 47 species
AT5G01430 No alias Got1/Sft2-like vescicle transport protein family 0.02 OrthoFinder output from all 47 species
Adi_g041116 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.03 OrthoFinder output from all 47 species
Adi_g041117 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.02 OrthoFinder output from all 47 species
Ala_g21787 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.02 OrthoFinder output from all 47 species
Als_g37316 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.03 OrthoFinder output from all 47 species
Azfi_s0288.g063248 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.03 OrthoFinder output from all 47 species
Ceric.37G014300.1 Ceric.37G014300 regulatory protein *(GOT1) of COPII coatomer machinery &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001095.24 No alias Vesicle transport protein GOT1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre09.g389100 No alias Vesicle transport protein GOT1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g08942 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.03 OrthoFinder output from all 47 species
Solyc09g098500.4.1 Solyc09g098500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0034998 oligosaccharyltransferase I complex IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007305 Vesicle_transpt_Got1/SFT2 16 115
No external refs found!