1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g50313

Dde_g50313 (AGO1)


Aliases : AGO1

Description : regulatory protein *(AGO7) of transacting siRNA pathway & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g50313

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23299.t1 AGO7, ZIP,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59574.t1 AGO1, Aspi01Gene59574 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Azfi_s0460.g072055 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Cba_g16426 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77990 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.6 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Dcu_g48433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033726001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
LOC_Os02g40320.1 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
LOC_Os07g28850.1 AGO1, LOC_Os07g28850 Protein argonaute 18 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp1g18110.1 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Ore_g16802 AGO5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069280.2.1 AGO2, Solyc02g069280 siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.04 OrthoFinder output from all 47 species
Solyc03g111760.3.1 AGO4, OCP11,... Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003165 Piwi 800 1100
IPR032474 Argonaute_N 317 443
IPR014811 ArgoL1 453 502
IPR003100 PAZ_dom 520 625
IPR032472 ArgoL2 641 688
No external refs found!