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Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00222920 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00242080 | CRR28,... | Pentatricopeptide repeat-containing protein At1g59720,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00075660 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00029450 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07273 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g36228 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09609 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28410 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33111 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g38034 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g59712 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g67654 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007907 | No alias | not classified & original description: CDS=160-2841 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009143 | No alias | not classified & original description: CDS=1-4677 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0036.g025743 | No alias | not classified & original description: CDS=1-2553 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048778 | No alias | not classified & original description: CDS=1-2676 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0171.g055669 | No alias | not classified & original description: CDS=1-2286 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0405.g068372 | No alias | not classified & original description: CDS=1-2844 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06947 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20724 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36071 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g68679 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G050700.1 | Ceric.22G050700 | not classified & original description: pacid=50614024... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G083600.1 | Ceric.29G083600 | ssDNA-binding protein *(OSB) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g25154 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g31782 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08180 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08906 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08949 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g32689 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03570 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g17642 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g29464 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g41493 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009574001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g60250.1 | LOC_Os01g60250 | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g58980.1 | LOC_Os04g58980 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g47370.1 | LOC_Os07g47370 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03866 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g12392 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17561 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g18318 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18961 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g34151 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g36343 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54502 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g35930 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04332 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g17745 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g18562 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g22646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41121 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g44114 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g45892 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15290 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g30346 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g30793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12341 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02838 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13600 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g15324 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16554 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57972 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63875 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g64857 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07011 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09254 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10348 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14613 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15635 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18869 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29654 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29767 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32640 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g48204 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g52997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53202 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53718 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g54649 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g64055 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002140 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=75-2237 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006120 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=52-378 | 0.03 | OrthoFinder output from all 47 species | |
| Smo61782 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114660.1.1 | Solyc03g114660 | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15227 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20189 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g26887 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g42246 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g47727 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g04193 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05462 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g08446 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g17885 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23117 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g25572 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g29955 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013232_P001 | Zm00001e013232 | Pentatricopeptide repeat-containing protein At2g36730... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014549_P001 | CRR22, Zm00001e014549 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039026_P001 | OTP82, Zm00001e039026 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 76 | 122 |
| IPR002885 | Pentatricopeptide_repeat | 180 | 209 |
| IPR002885 | Pentatricopeptide_repeat | 319 | 346 |
| IPR002885 | Pentatricopeptide_repeat | 152 | 173 |
| IPR002885 | Pentatricopeptide_repeat | 358 | 380 |
| IPR002885 | Pentatricopeptide_repeat | 50 | 72 |
| IPR002885 | Pentatricopeptide_repeat | 254 | 275 |
| IPR002885 | Pentatricopeptide_repeat | 282 | 311 |
| IPR002885 | Pentatricopeptide_repeat | 11 | 40 |
| No external refs found! |