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  5. Dde_g47919

Dde_g47919 (emb2191)


Aliases : emb2191

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none


Gene families : OG0001810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001810_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g47919

Target Alias Description ECC score Gene Family Method Actions
AT1G48175 emb2191 Cytidine/deoxycytidylate deaminase family protein 0.02 OrthoFinder output from all 47 species
Ala_g10308 TADA, ATTADA chloroplast-tRNA adenosine deaminase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g008650.4.1 emb2191, Solyc07g008650 component TAD2 of TAD2-TAD3 tRNA adenosine deaminase complex 0.02 OrthoFinder output from all 47 species
Spa_g21666 TADA, ATTADA chloroplast-tRNA adenosine deaminase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002125 CMP_dCMP_dom 48 152
No external refs found!