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  5. Dde_g46643

Dde_g46643 (HSS, ARF1-BP, ARF2, ORE14)


Aliases : HSS, ARF1-BP, ARF2, ORE14

Description : not classified & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g46643
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00141830 HSS, ARF1-BP,... RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
AT5G62000 HSS, ARF1-BP, ARF2, ORE14 auxin response factor 2 0.03 OrthoFinder output from all 47 species
Ala_g06926 ARF1 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11834 ARF16 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12632 ARF16 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59651 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05880.t1 ARF19, IAA22,... ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46203.t1 HSS, ARF1-BP,... ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46204.t2 HSS, ARF1-BP,... ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035933 ARF6 not classified & original description: CDS=1-678 0.02 OrthoFinder output from all 47 species
Ceric.29G070000.1 ARF6, Ceric.29G070000 ARF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g44007 ARF16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36299 ARF6 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08602 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08681 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008950001 ARF17 Auxin response factor 17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01015035001 ARF19, IAA22, ARF11 RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
GSVIVT01025691001 ARF16 RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
Gb_02925 ARF19, IAA22, ARF11 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Gb_23186 HSS, ARF1-BP, ARF2, ORE14 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g43920.1 ARF3, ETT, LOC_Os05g43920 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Lfl_g18657 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13395 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19283 ARF4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42999 ARF6 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008995 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Smo117217 ARF6 RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
Zm00001e030325_P003 ARF6, Zm00001e030325 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!