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  5. Dde_g46381

Dde_g46381


Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none


Gene families : OG0007954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007954_tree ,
OG0055950 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g46381
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Als_g18360 No alias small subunit of ribulose-1,5-bisphosphat... 0.14 OrthoFinder output from all 47 species
Aop_g62345 No alias small subunit of ribulose-1,5-bisphosphat... 0.12 OrthoFinder output from all 47 species
Aop_g68148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68783 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Aop_g68784 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 OrthoFinder output from all 47 species
Cba_g36893 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 OrthoFinder output from all 47 species
Dac_g15046 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Dac_g35392 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Dcu_g06004 No alias small subunit of ribulose-1,5-bisphosphat... 0.11 OrthoFinder output from all 47 species
Gb_00391 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Len_g38133 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Lfl_g04457 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Msp_g11427 No alias small subunit of ribulose-1,5-bisphosphat... 0.17 OrthoFinder output from all 47 species
Msp_g17648 No alias small subunit of ribulose-1,5-bisphosphat... 0.18 OrthoFinder output from all 47 species
Msp_g25590 No alias small subunit of ribulose-1,5-bisphosphat... 0.16 OrthoFinder output from all 47 species
Ppi_g23781 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Tin_g06955 No alias small subunit of ribulose-1,5-bisphosphat... 0.12 OrthoFinder output from all 47 species
Tin_g06956 No alias small subunit of ribulose-1,5-bisphosphat... 0.14 OrthoFinder output from all 47 species
Cba_g20984 No alias small subunit of ribulose-1,5-bisphosphat... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!