Dde_g43590 (MED34, ATRECQ2, RECQL2)

Aliases : MED34, ATRECQ2, RECQL2

Description : component *(MED34) of MEDIATOR transcription co-activator complex & original description: none

Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g43590

Target	Alias	Description	ECC score	Gene Family Method
Adi_g085938	MED34, ATRECQ2, RECQL2	component *(MED34) of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
Ceric.04G073400.1	MED34, ATRECQ2,...	component *(MED34) of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
Ceric.17G060200.1	ATRECQ4A,...	helicase component *(RecQ4A) of RTR Holliday junction...	0.03	OrthoFinder output from all 47 species
Dac_g16350	RecQl3, ATRECQ3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g19620	MED34, ATRECQ2, RECQL2	component *(MED34) of MEDIATOR transcription...	0.04	OrthoFinder output from all 47 species
LOC_Os11g48090.5	MED34, ATRECQ2,...	component MED34 of MEDIATOR transcription co-activator complex	0.02	OrthoFinder output from all 47 species
Lfl_g31337	RECQI1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp4g00540.1	MED34, ATRECQ2, RECQL2	component MED34 of MEDIATOR transcription co-activator complex	0.02	OrthoFinder output from all 47 species
Msp_g14824	RecQl3, ATRECQ3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g41947	MED34, ATRECQ2, RECQL2	component *(MED34) of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
Ppi_g48732	RecQl3, ATRECQ3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g25559	No alias	helicase component *(RecQ4A) of RTR Holliday junction...	0.02	OrthoFinder output from all 47 species
Sam_g49278	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g042010.4.1	RecQl3, ATRECQ3,...	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e002693_P002	MED34, ATRECQ2,...	component MED34 of MEDIATOR transcription co-activator complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003678	DNA helicase activity	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043138	3'-5' DNA helicase activity	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0016459	myosin complex	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002121	HRDC_dom	616	679
IPR011545	DEAD/DEAH_box_helicase_dom	97	263
IPR032284	RecQ_Zn-bd	424	479
IPR001650	Helicase_C	306	411
IPR018982	RQC_domain	486	597

External Links

No external refs found!

Dde_g43590 (MED34, ATRECQ2, RECQL2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation