- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dde_g42097 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G27710 | No alias | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
| AT2G27720 | No alias | 60S acidic ribosomal protein family | 0.04 | OrthoFinder output from all 47 species | |
| AT3G44590 | No alias | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g15265 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g51984 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037804 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g69352 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020830.75 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Cre02.g143050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g32367 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g29004 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g31241 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36046 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033814001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39007 | No alias | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g06260.1 | No alias | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g08160.1 | No alias | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g24414 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_27060V3.1 | Pp3c1_27060 | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g21789 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g38251 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g47728 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08492 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17151 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38961 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g40093 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo139397 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g067100.2.1 | Solyc11g067100 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g40832 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g19572 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026591_P001 | Zm00001e026591 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026592_P001 | Zm00001e026592 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026593_P001 | Zm00001e026593 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041900_P001 | Zm00001e041900 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0004864 | protein phosphatase inhibitor activity | IEP | HCCA |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | HCCA |
| CC | GO:0005751 | mitochondrial respiratory chain complex IV | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019212 | phosphatase inhibitor activity | IEP | HCCA |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
| CC | GO:0019866 | organelle inner membrane | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | HCCA |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | HCCA |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | HCCA |
| CC | GO:0045277 | respiratory chain complex IV | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | HCCA |
| BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
| CC | GO:0070069 | cytochrome complex | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| CC | GO:0098803 | respiratory chain complex | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |