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  5. Lfl_g19937

Lfl_g19937


Description : not classified & original description: none


Gene families : OG0001243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001243_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g19937

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00205550 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aob_g10918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66605.t1 Aspi01Gene66605 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G027700.1 Ceric.05G027700 not classified & original description: pacid=50578122... 0.04 OrthoFinder output from all 47 species
Ceric.05G038400.1 Ceric.05G038400 not classified & original description: pacid=50578358... 0.03 OrthoFinder output from all 47 species
Ceric.1Z089100.1 Ceric.1Z089100 not classified & original description: pacid=50607786... 0.02 OrthoFinder output from all 47 species
Cre11.g481900 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029899001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g70060.1 LOC_Os01g70060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g54420.1 LOC_Os04g54420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g03570.1 LOC_Os11g03570 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os12g03340.1 LOC_Os12g03340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10437244g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_12916g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g09520.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g05377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g012740.2.1 Solyc11g012740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018790_P002 Zm00001e018790 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024045_P003 Zm00001e024045 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006569 CID_dom 9 120
No external refs found!