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  5. Lfl_g19872

Lfl_g19872


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g19872

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00116980 evm_27.TU.AmTr_v1... U-box domain-containing protein 62 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g024353 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112813 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11530 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29971 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15027 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47007 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12522 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Mp3g08800.1 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g44015 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02352 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04513 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32791 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02786 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08509 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17020 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g052220.3.1 Solyc05g052220 U-box domain-containing protein 62 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!