Dde_g40992


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g40992

Target Alias Description ECC score Gene Family Method Actions
AT5G44230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g069020 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06397 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27579 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0245.g060017 No alias not classified & original description: CDS=1-2076 0.02 OrthoFinder output from all 47 species
Cba_g29672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G070800.1 Ceric.29G070800 not classified & original description: pacid=50625555... 0.02 OrthoFinder output from all 47 species
Dcu_g04207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07075 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07608 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16948 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g44480.1 LOC_Os02g44480 Pentatricopeptide repeat-containing protein At5g39350... 0.02 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g35181 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010154 No alias not classified & original description: CDS=1-2595 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0252.g026781 No alias not classified & original description: CDS=1-2700 0.02 OrthoFinder output from all 47 species
Sam_g29372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07054 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27671 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55586 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17465 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 124 172
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 199 225
No external refs found!