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  5. Lfl_g19587

Lfl_g19587


Description : not classified & original description: none


Gene families : OG0006276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g19587

Target Alias Description ECC score Gene Family Method Actions
Als_g10258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020261 No alias not classified & original description: CDS=1-1290 0.02 OrthoFinder output from all 47 species
Sam_g26041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR010666 Znf_GRF 242 285
IPR010666 Znf_GRF 333 376
IPR010666 Znf_GRF 186 229
IPR001878 Znf_CCHC 404 420
IPR001878 Znf_CCHC 522 537
IPR001878 Znf_CCHC 454 470
IPR001878 Znf_CCHC 147 163
No external refs found!