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  5. Dde_g37891

Dde_g37891


Description : not classified & original description: none


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g37891
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT1G58370 ATXYN1, RXF12 glycosyl hydrolase family 10 protein /... 0.03 OrthoFinder output from all 47 species
AT2G14690 No alias Glycosyl hydrolase superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G08160 No alias glycosyl hydrolase family 10 protein /... 0.02 OrthoFinder output from all 47 species
Aop_g08099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G036100.1 Ceric.30G036100 not classified & original description: pacid=50608372... 0.04 OrthoFinder output from all 47 species
GSVIVT01037825001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01037833001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_02219 No alias no description available(sp|q84wt5|xyn5l_arath : 355.0) 0.07 OrthoFinder output from all 47 species
LOC_Os01g04290.1 LOC_Os01g04290 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.04 OrthoFinder output from all 47 species
LOC_Os03g10478.1 LOC_Os03g10478 no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.06 OrthoFinder output from all 47 species
LOC_Os03g47010.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os05g25560.1 LOC_Os05g25560 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
Len_g07345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27615 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006025 No alias not classified & original description: CDS=1-2073 0.03 OrthoFinder output from all 47 species
Solyc04g077190.4.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
Tin_g27477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000757_P001 Zm00001e000757 no description available(sp|q84wt5|xyn5l_arath : 397.0) 0.02 OrthoFinder output from all 47 species
Zm00001e002760_P001 Zm00001e002760 no description available(sp|q680b7|xyn4_arath : 360.0) 0.02 OrthoFinder output from all 47 species
Zm00001e012296_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
Zm00001e016992_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.07 OrthoFinder output from all 47 species
Zm00001e016997_P001 Zm00001e016997 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
Zm00001e038773_P006 Zm00001e038773 no description available(sp|q84wt5|xyn5l_arath : 388.0) 0.03 OrthoFinder output from all 47 species
Zm00001e040632_P001 Zm00001e040632 no description available(sp|q680b7|xyn4_arath : 318.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001000 GH10_dom 245 506
IPR003305 CenC_carb-bd 46 179
No external refs found!