Aliases : AtHPR1, AtTHO1, THO1, HPR1
Description : component *(THOC1/HPR1) of mRNP trafficking THO subcomplex & original description: none
Gene families : OG0005828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005828_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g07899 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene64611.t1 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z091900.1 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001229.4 | AtHPR1, AtTHO1,... | RNA processing.messenger ribonucleoprotein particle... | 0.01 | OrthoFinder output from all 47 species | |
Cre16.g695300 | AtHPR1, AtTHO1,... | RNA processing.messenger ribonucleoprotein particle... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g09998 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
Gb_11418 | AtHPR1, AtTHO1,... | component THOC1/HPR1 of mRNP trafficking THO subcomplex | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g01970.1 | AtHPR1, AtTHO1,... | component THOC1/HPR1 of mRNP trafficking THO subcomplex | 0.03 | OrthoFinder output from all 47 species | |
Sam_g15781 | No alias | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
Smo96989 | AtHPR1, AtTHO1,... | RNA processing.messenger ribonucleoprotein particle... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g096600.4.1 | AtHPR1, AtTHO1,... | component THOC1/HPR1 of mRNP trafficking THO subcomplex | 0.04 | OrthoFinder output from all 47 species | |
Tin_g02017 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043248 | proteasome assembly | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0060090 | molecular adaptor activity | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR021861 | THO_THOC1 | 117 | 519 |
No external refs found! |