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  5. Dde_g31782

Dde_g31782 (PSB28)


Aliases : PSB28

Description : protein involved in PS-II assembly *(Psb28) & original description: none


Gene families : OG0005594 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005594_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g31782
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00160690 PSB28,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AT4G28660 PSB28 photosystem II reaction center PSB28 protein 0.03 OrthoFinder output from all 47 species
Ala_g08604 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.03 OrthoFinder output from all 47 species
Als_g06924 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.03 OrthoFinder output from all 47 species
Aop_g06562 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.04 OrthoFinder output from all 47 species
Cre10.g440450 PSB28 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g09174 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g46324 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01028434001 PSB28 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Gb_39548 PSB28 Psb28 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
LOC_Os01g71190.1 PSB28, LOC_Os01g71190 Psb28 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Len_g02114 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g34843 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.03 OrthoFinder output from all 47 species
Mp2g14630.1 PSB28 Psb28 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Ppi_g14394 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.05 OrthoFinder output from all 47 species
Spa_g02888 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.03 OrthoFinder output from all 47 species
Tin_g00351 PSB28 protein involved in PS-II assembly *(Psb28) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e018703_P001 PSB28, Zm00001e018703 Psb28 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003856 3-dehydroquinate synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR005610 PSII_Psb28_class-1 85 190
No external refs found!