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  5. Lfl_g18923

Lfl_g18923 (PLDBETA2)


Aliases : PLDBETA2

Description : EC_3.1 hydrolase acting on ester bond & original description: none


Gene families : OG0000229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g18923

Target Alias Description ECC score Gene Family Method Actions
AT1G55180 PLDALPHA4, PLDEPSILON phospholipase D alpha 4 0.02 OrthoFinder output from all 47 species
Adi_g001210 PLDBETA2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Adi_g007802 PLDBETA1, PLDBETA EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aob_g18745 PLDALPHA1, PLD EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene59497.t1 PLDALPHA1, PLD,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Cba_g39013 PLDBETA2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G080700.1 PLDBETA2, Ceric.03G080700 EC_3.1 hydrolase acting on ester bond & original... 0.08 OrthoFinder output from all 47 species
Gb_35650 PLDGAMMA1, MEE54 Phospholipase D gamma 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os01g07760.2 PLDALPHA1, PLD,... phospholipase D (PLD-alpha) 0.02 OrthoFinder output from all 47 species
Ore_g11169 PLDALPHA1, PLD EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Ore_g26658 PLDALPHA1, PLD EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Pnu_g09945 PLDALPHA1, PLD EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Sam_g26995 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025202 PLD-like_dom 762 945
IPR001736 PLipase_D/transphosphatidylase 567 601
IPR000008 C2_dom 232 364
IPR024632 PLipase_D_C 983 1053
No external refs found!