Dde_g30591 (TADA, ATTADA)

Aliases : TADA, ATTADA

Description : chloroplast-tRNA adenosine deaminase & original description: none

Gene families : OG0001810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001810_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g30591

Target	Alias	Description	ECC score	Gene Family Method
Als_g10904	TADA, ATTADA	chloroplast-tRNA adenosine deaminase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene06605.t1	TADA, ATTADA,...	chloroplast-tRNA adenosine deaminase & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene07115.t1	emb2191, Aspi01Gene07115	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.01	OrthoFinder output from all 47 species
Dde_g07082	TADA, ATTADA	chloroplast-tRNA adenosine deaminase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g24957	TADA, ATTADA	chloroplast-tRNA adenosine deaminase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g18285	TADA, ATTADA	chloroplast-tRNA adenosine deaminase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g20272	emb2191	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.01	OrthoFinder output from all 47 species
Pir_g39794	TADA, ATTADA	chloroplast-tRNA adenosine deaminase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	None	Extended
BP	GO:0002100	tRNA wobble adenosine to inosine editing	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004000	adenosine deaminase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006382	adenosine to inosine editing	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008251	tRNA-specific adenosine deaminase activity	IEA	Interproscan
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016553	base conversion or substitution editing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	None	Extended
MF	GO:0019239	deaminase activity	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0061617	MICOS complex	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR028883	tRNA_aden_deaminase	114	216

External Links

No external refs found!

Dde_g30591 (TADA, ATTADA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation