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Aliases : SHI
Description : SRS-type transcription factor & original description: none
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dde_g30563 | |
| Cluster | HCCA: Cluster_172 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00046p00141180 | LRP1,... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00063p00161200 | LRP1,... | RNA biosynthesis.transcriptional activation.SRS... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G19790 | SRS7 | SHI-related sequence 7 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G51060 | SRS1, STY1 | Lateral root primordium (LRP) protein-related | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g061023 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g079607 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g16410 | LRP1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17440 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27015 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035783 | SHI | SRS-type transcription factor & original description: CDS=1-2148 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0861.g090073 | SHI | SRS-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G028100.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G058400.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g13440 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40676 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01024206001 | SHI | RNA biosynthesis.transcriptional activation.SRS... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037267001 | No alias | RNA biosynthesis.transcriptional activation.SRS... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g72490.1 | LRP1, LOC_Os01g72490 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g31120 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_2299g0010 | LRP1 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g19510.1 | SHI | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g19370 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g26315 | LRP1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g48067 | LRP1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16685 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g59296 | SHI | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013968 | SHI | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0150.g023316 | SRS1, STY1 | not classified & original description: CDS=12-590 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g062400.3.1 | SRS1, STY1,... | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g054070.1.1 | SRS5, Solyc10g054070 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g31728 | SRS8 | SRS-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g50442 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g29778 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g30774 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e004006_P001 | SHI, Zm00001e004006 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010227_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013256_P002 | SHI, Zm00001e013256 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e024681_P001 | SHI, Zm00001e024681 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030189_P001 | SHI, Zm00001e030189 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031567_P001 | LRP1, Zm00001e031567 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |