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  5. Dde_g30161

Dde_g30161 (WTF1, AtWTF1)


Aliases : WTF1, AtWTF1

Description : not classified & original description: none


Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g30161

Target Alias Description ECC score Gene Family Method Actions
AT5G62990 emb1692 Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
Ala_g12370 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0581.g078326 WTF1, AtWTF1 not classified & original description: CDS=186-1394 0.06 OrthoFinder output from all 47 species
Ceric.25G074200.1 WTF1, AtWTF1,... not classified & original description: pacid=50593386... 0.02 OrthoFinder output from all 47 species
LOC_Os09g29760.1 LOC_Os09g29760 Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Len_g11779 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g05402 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Spa_g07945 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 41 367
No external refs found!