Description : ARF-GTPase *(ARF1) & original description: none
Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dde_g30050 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G62290 | ARFA1E, ATARFA1E | ADP-ribosylation factor A1E | 0.03 | OrthoFinder output from all 47 species | |
Adi_g003699 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g009714 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g048023 | ATARFA1F, ARFA1F | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g12102 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g31131 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g19871 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g07482 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aop_g19389 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g49446 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g68389 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g71009 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G076800.1 | ATARFA1B,... | ARF-GTPase *(ARF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G015600.1 | ATARFA1B,... | ARF-GTPase *(ARF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000663.21 | ATARFA1F, ARFA1F | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g04124 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g05473 | ATARFA1F, ARFA1F | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g05484 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g12228 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g59740.1 | ATARFA1B,... | ARF-GTPase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g41060.1 | ATARFA1F,... | ARF-GTPase | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g04441 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g23069 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g31478 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_101085g0010 | ARFA1E, ATARFA1E | ARF-GTPase | 0.02 | OrthoFinder output from all 47 species | |
MA_4349g0020 | ATARFA1F, ARFA1F | ARF-GTPase | 0.03 | OrthoFinder output from all 47 species | |
Mp3g13920.1 | ATARFA1F, ARFA1F | ARF-GTPase | 0.02 | OrthoFinder output from all 47 species | |
Msp_g25108 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g15523 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g02984 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pir_g06024 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pp3c10_20740V3.1 | ARFA1E,... | ADP-ribosylation factor A1E | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g63645 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g008000.3.1 | ATARFA1B,... | ARF-GTPase | 0.04 | OrthoFinder output from all 47 species | |
Spa_g05142 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29324 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g49717 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g51715 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g02993 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g05371 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g05379 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e033127_P003 | ARF1A1C, Zm00001e033127 | ARF-GTPase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042393 | histone binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0045048 | protein insertion into ER membrane | IEP | HCCA |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
BP | GO:0051205 | protein insertion into membrane | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |