Dde_g29928


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g29928

Target Alias Description ECC score Gene Family Method Actions
Adi_g012590 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g08664 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g12875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08020 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g15637 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0336.g065546 No alias not classified & original description: CDS=1-2493 0.05 OrthoFinder output from all 47 species
Cba_g25946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g57127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G037000.1 Ceric.12G037000 not classified & original description: pacid=50600637... 0.03 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.04 OrthoFinder output from all 47 species
Dac_g16300 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23808 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g14876 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g15440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06340 CRM3, HCF152 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13290 EMB2279, EMB88 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08780 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14407 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g19507 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10297 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g42843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49332 CRM3, HCF152 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 256 309
IPR002885 Pentatricopeptide_repeat 434 460
IPR002885 Pentatricopeptide_repeat 473 521
IPR002885 Pentatricopeptide_repeat 547 569
No external refs found!