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  5. Dde_g26558

Dde_g26558 (NAF1, ATNAF1)


Aliases : NAF1, ATNAF1

Description : non-core component *(NAF1) of H/ACA snoRNP RNA pseudouridylation complex & original description: none


Gene families : OG0004285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g26558

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00263450 NAF1, ATNAF1,... RNA processing.RNA modification.pseudouridylation.H/ACA... 0.03 OrthoFinder output from all 47 species
Aev_g12784 NAF1, ATNAF1 non-core component *(NAF1) of H/ACA snoRNP RNA... 0.03 OrthoFinder output from all 47 species
Als_g21824 NAF1, ATNAF1 non-core component *(NAF1) of H/ACA snoRNP RNA... 0.03 OrthoFinder output from all 47 species
Aop_g06159 NAF1, ATNAF1 non-core component *(NAF1) of H/ACA snoRNP RNA... 0.02 OrthoFinder output from all 47 species
Zm00001e032062_P001 NAF1, ATNAF1,... non-core component Nhp2/Naf1 of H/ACA small nucleolar... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007504 H/ACA_rnp_Gar1/Naf1 349 432
No external refs found!