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  5. Dde_g24296

Dde_g24296


Description : not classified & original description: none


Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g24296

Target Alias Description ECC score Gene Family Method Actions
AT5G44930 ARAD2 Exostosin family protein 0.02 OrthoFinder output from all 47 species
Azfi_s0063.g035309 No alias not classified & original description: CDS=67-1440 0.03 OrthoFinder output from all 47 species
Dde_g00598 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01029936001 No alias Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ore_g01332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 66 377
No external refs found!