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  5. Dde_g23796

Dde_g23796


Description : not classified & original description: none


Gene families : OG0007904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g23796
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00242510 evm_27.TU.AmTr_v1... Thylakoid lumenal 19 kDa protein, chloroplastic... 0.04 OrthoFinder output from all 47 species
Adi_g039955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102973 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g04818 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g06066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G010600.1 Ceric.10G010600 not classified & original description: pacid=50613083... 0.04 OrthoFinder output from all 47 species
Dcu_g07970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_20026 No alias Thylakoid lumenal 19 kDa protein, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os08g39430.1 LOC_Os08g39430 Thylakoid lumenal 19 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g31505 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g00701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_132558g0010 No alias Thylakoid lumenal 19 kDa protein, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp2g02710.1 No alias Thylakoid lumenal 19 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g11612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_11800V3.1 Pp3c4_11800 Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.01 OrthoFinder output from all 47 species
Ppi_g23945 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc01g087040.2.1 Solyc01g087040 Thylakoid lumenal 19 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g11799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00522 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003510_P001 Zm00001e003510 Thylakoid lumenal 19 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 159 300
No external refs found!