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  5. Dde_g23565

Dde_g23565


Description : ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none


Gene families : OG0002525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g23565

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00198080 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00198510 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.02 OrthoFinder output from all 47 species
GSVIVT01026271001 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.02 OrthoFinder output from all 47 species
MA_1171557g0010 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.03 OrthoFinder output from all 47 species
MA_15009g0010 PUB26 Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.03 OrthoFinder output from all 47 species
Msp_g15480 No alias ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 453 523
IPR001680 WD40_repeat 1201 1235
IPR001680 WD40_repeat 1169 1192
No external refs found!