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5. Nbi_g36970

Nbi_g36970

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2. Species
3. Davallia denticulata
4. Sequence
5. Dde_g23279

Dde_g23279 (BMY8, BAM3, CT-BMY)

Aliases : BMY8, BAM3, CT-BMY

Description : EC_3.2 glycosylase & original description: none

Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)

Expression Profile

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Co-expression Networks

Type	Description	Actions
Neighborhood	HRR: Dde_g23279

Expression Context Conservation (ECC)

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00058p00155330	BMY8, BAM3,...	Carbohydrate metabolism.starch...	0.03	OrthoFinder output from all 47 species
Ala_g07537	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.05	OrthoFinder output from all 47 species
Als_g05689	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g09521	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.19G057400.1	BAM1, BMY7,...	EC_3.2 glycosylase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g22635	BMY5, BAM6	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g10846	BMY5, BAM6	EC_3.2 glycosylase & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g30432	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g35885	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc08g077530.3.1	BMY8, BAM3,...	beta amylase	0.03	OrthoFinder output from all 47 species
Solyc08g082810.4.1	BMY8, BAM3,...	beta amylase	0.04	OrthoFinder output from all 47 species

Functional Annotation

• GO
• Predicted GO
• InterPro

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	141	567

External Links

No external refs found!