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  5. Dde_g23077

Dde_g23077


Description : not classified & original description: none


Gene families : OG0003504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g23077

Target Alias Description ECC score Gene Family Method Actions
Ceric.35G044600.1 Ceric.35G044600 component *(SRm160) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Dac_g18749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024906001 No alias RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Gb_33063 No alias component SRm160 of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Mp8g09170.1 No alias component SRm160 of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Nbi_g09941 No alias component *(SRm160) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Solyc09g030390.3.1 Solyc09g030390 component SRm160 of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Spa_g23109 No alias component *(SRm160) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Spa_g50878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!