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  5. Dde_g22620

Dde_g22620


Description : carboxy-terminal processing peptidase *(CtpA) & original description: none


Gene families : OG0001069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g22620

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00127450 evm_27.TU.AmTr_v1... Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder output from all 47 species
AT5G46390 No alias Peptidase S41 family protein 0.04 OrthoFinder output from all 47 species
Adi_g019837 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Aob_g05172 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Cba_g08933 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Cba_g18332 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Cre10.g420550 No alias Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder output from all 47 species
Cre10.g453807 No alias Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder output from all 47 species
Dcu_g12612 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g19495 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01001855001 No alias Protein modification.peptide maturation.plastid.CtpA... 0.06 OrthoFinder output from all 47 species
GSVIVT01021388001 No alias Protein modification.peptide maturation.plastid.CtpA... 0.04 OrthoFinder output from all 47 species
Len_g02340 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Len_g15226 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g30878 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.04 OrthoFinder output from all 47 species
Mp6g10620.1 No alias carboxy-terminal processing peptidase (CtpA) 0.03 OrthoFinder output from all 47 species
Mp7g16940.1 No alias carboxy-terminal processing peptidase (CtpA) 0.03 OrthoFinder output from all 47 species
Msp_g07773 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.04 OrthoFinder output from all 47 species
Smo143443 No alias Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder output from all 47 species
Solyc02g071190.4.1 Solyc02g071190 carboxy-terminal processing peptidase (CtpA) 0.02 OrthoFinder output from all 47 species
Solyc12g097030.2.1 Solyc12g097030 carboxy-terminal processing peptidase (CtpA) 0.02 OrthoFinder output from all 47 species
Spa_g07291 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Spa_g16639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036922_P004 Zm00001e036922 carboxy-terminal processing peptidase (CtpA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR041489 PDZ_6 402 455
IPR005151 Tail-specific_protease 493 654
No external refs found!