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  5. Dde_g21513

Dde_g21513 (MRL1)


Aliases : MRL1

Description : rbcL-mRNA stability factor *(MRL1) & original description: none


Gene families : OG0004421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g21513
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00224p00011500 MRL1,... Pentatricopeptide repeat-containing protein MRL1,... 0.02 OrthoFinder output from all 47 species
AMTR_s00357p00011320 MRL1,... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00451p00003410 MRL1,... Pentatricopeptide repeat-containing protein MRL1,... 0.03 OrthoFinder output from all 47 species
AT4G34830 MRL1 Pentatricopeptide repeat (PPR) superfamily protein 0.07 OrthoFinder output from all 47 species
Ala_g16036 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02579 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g03622 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11874 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25377.t1 MRL1, Aspi01Gene25377 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02698 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G061200.1 Ceric.28G061200 rbcL-mRNA stability factor *(MRL1) & original... 0.05 OrthoFinder output from all 47 species
Dac_g12659 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g03176 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024119001 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.04 OrthoFinder output from all 47 species
Gb_33501 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.03 OrthoFinder output from all 47 species
Lfl_g02395 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429571g0010 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.03 OrthoFinder output from all 47 species
MA_9899301g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Mp3g17150.1 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.04 OrthoFinder output from all 47 species
Mp3g17160.1 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.04 OrthoFinder output from all 47 species
Nbi_g03133 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g08612 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17500 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08167 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12546 No alias rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g111020.3.1 MRL1, Solyc01g111020 Pentatricopeptide repeat-containing protein MRL1,... 0.04 OrthoFinder output from all 47 species
Spa_g01352 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e002719_P003 MRL1, Zm00001e002719 Pentatricopeptide repeat-containing protein MRL1,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 287 445
IPR033443 PPR_long 111 280
No external refs found!