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  5. Dde_g18187

Dde_g18187


Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g18187

Target Alias Description ECC score Gene Family Method Actions
AT2G22300 CAMTA3, SR1 signal responsive 1 0.03 OrthoFinder output from all 47 species
Als_g06416 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14066 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G019600.1 Ceric.31G019600 CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g08650 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g27080.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
MA_16615g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g30117 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40792 No alias CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g056270.4.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 671 730
IPR000048 IQ_motif_EF-hand-BS 884 902
IPR000048 IQ_motif_EF-hand-BS 908 926
IPR005559 CG-1_dom 52 165
No external refs found!