1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g18173

Dde_g18173


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0016913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016913_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g18173

Target Alias Description ECC score Gene Family Method Actions
Msp_g42301 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28886 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 581 628
IPR002885 Pentatricopeptide_repeat 376 423
IPR002885 Pentatricopeptide_repeat 277 323
IPR002885 Pentatricopeptide_repeat 478 525
IPR002885 Pentatricopeptide_repeat 181 205
IPR002885 Pentatricopeptide_repeat 252 275
IPR002885 Pentatricopeptide_repeat 657 679
No external refs found!