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  5. Dde_g17531

Dde_g17531 (SAMDC)


Aliases : SAMDC

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g17531

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00164800 evm_27.TU.AmTr_v1... Polyamine metabolism.putrescine.synthesis.cytosolic... 0.02 OrthoFinder output from all 47 species
Aop_g13099 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09673 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
MA_123449g0010 No alias S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Mp7g18100.1 No alias S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Msp_g07363 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10143 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g18523 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39268 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo100475 No alias Polyamine... 0.04 OrthoFinder output from all 47 species
Smo106449 No alias Polyamine... 0.03 OrthoFinder output from all 47 species
Smo232921 No alias Polyamine metabolism.putrescine.synthesis.cytosolic... 0.03 OrthoFinder output from all 47 species
Solyc01g080380.4.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
Solyc06g054460.1.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
Zm00001e035959_P001 Zm00001e035959 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEA Interproscan
BP GO:0006597 spermine biosynthetic process IEA Interproscan
BP GO:0008295 spermidine biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 260 426
IPR001985 S-AdoMet_decarboxylase 12 185
No external refs found!