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  5. Dde_g17275

Dde_g17275


Description : not classified & original description: none


Gene families : OG0012126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012126_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g17275
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Als_g18252 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G042900.1 Ceric.38G042900 not classified & original description: pacid=50580589... 0.04 OrthoFinder output from all 47 species
Dac_g16376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37302 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 449 479
IPR002885 Pentatricopeptide_repeat 421 446
IPR002885 Pentatricopeptide_repeat 726 747
IPR002885 Pentatricopeptide_repeat 147 192
IPR002885 Pentatricopeptide_repeat 347 394
IPR002885 Pentatricopeptide_repeat 650 697
IPR002885 Pentatricopeptide_repeat 547 594
IPR002885 Pentatricopeptide_repeat 247 293
No external refs found!