- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ATAB2
Description : not classified & original description: none
Gene families : OG0004008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004008_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dde_g16983 | |
| Cluster | HCCA: Cluster_114 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g014503 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g07833 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09787 | ATAB2 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Als_g10261 | ATAB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g22462 | ATAB2 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g04128 | ATAB2 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g04239 | ATAB2 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g31544 | ATAB2 | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Aspi01Gene49930.t1 | ATAB2, Aspi01Gene49930 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene56263.t1 | ATAB2, Aspi01Gene56263 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene61714.t1 | ATAB2, Aspi01Gene61714 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene61715.t1 | ATAB2, Aspi01Gene61715 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03154 | ATAB2 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Cba_g27607 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G068300.1 | ATAB2, Ceric.21G068300 | not classified & original description: pacid=50604093... | 0.09 | OrthoFinder output from all 47 species | |
| Cre17.g702500 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18139 | ATAB2 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g14997 | ATAB2 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ehy_g05805 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032129001 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana | 0.12 | OrthoFinder output from all 47 species | |
| Gb_34984 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Arabidopsis... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_34986 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Oryza sativa... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g39740.1 | ATAB2, LOC_Os02g39740 | Protein TAB2 homolog, chloroplastic OS=Oryza sativa... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g18822 | ATAB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g01384 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g30744 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10430622g0010 | ATAB2 | Protein TAB2 homolog, chloroplastic OS=Zea mays... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09962 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g00688 | ATAB2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g01898 | ATAB2 | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Ore_g05869 | ATAB2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g02783 | ATAB2 | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Pir_g10236 | ATAB2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g03703 | ATAB2 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Ppi_g32398 | ATAB2 | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0061.g015277 | ATAB2 | not classified & original description: CDS=173-1390 | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g10050 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10068 | ATAB2 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g00858 | ATAB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g10787 | ATAB2 | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e015079_P001 | ATAB2, Zm00001e015079 | Protein TAB2 homolog, chloroplastic OS=Zea mays... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| MF | GO:0010242 | oxygen evolving activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0042549 | photosystem II stabilization | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| No external refs found! |