Dde_g15205 (SOC1, AGL20, ATSOC1)

Aliases : SOC1, AGL20, ATSOC1

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g15205

Target	Alias	Description	ECC score	Gene Family Method
Aob_g02910	AGL16	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g17972	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
GSVIVT01037024001	AGL62	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
Gb_39109	AGL6	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Lfl_g36481	No alias	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
MA_10432817g0010	SVP, AGL22	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
MA_15122g0010	AGL16	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
MA_57186g0010	AGL15	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
MA_5917g0010	AGL9, SEP3	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc06g064840.4.1	STK, AGL11,...	no description available(sp\|f6i457\|ag11c_vitvi : 172.0)	0.02	OrthoFinder output from all 47 species
Tin_g24496	AGL8, FUL	MADS/AGL-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	40	87
IPR002487	TF_Kbox	129	190

External Links

No external refs found!

Dde_g15205 (SOC1, AGL20, ATSOC1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation