1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g11577

Dde_g11577 (EMB86, EMB1030, EMB263)


Aliases : EMB86, EMB1030, EMB263

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0001528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001528_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g11577
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00214450 EMB86, EMB1030,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
AT5G22800 EMB86, EMB1030, EMB263 Alanyl-tRNA synthetase, class IIc 0.04 OrthoFinder output from all 47 species
Aev_g15227 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.08 OrthoFinder output from all 47 species
Ala_g13265 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.07 OrthoFinder output from all 47 species
Als_g05106 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Aob_g06066 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.07 OrthoFinder output from all 47 species
Aop_g08353 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Cba_g14026 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.09 OrthoFinder output from all 47 species
Ceric.20G012400.1 EMB86, EMB1030,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Cre08.g368900 EMB86, EMB1030, EMB263 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Dac_g09278 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.11 OrthoFinder output from all 47 species
Dcu_g08939 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g20259 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01023918001 EMB86, EMB1030, EMB263 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.08 OrthoFinder output from all 47 species
Gb_36215 EMB86, EMB1030, EMB263 alanine-tRNA ligase 0.08 OrthoFinder output from all 47 species
LOC_Os06g13660.1 EMB86, EMB1030,... alanine-tRNA ligase 0.1 OrthoFinder output from all 47 species
Len_g17359 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.12 OrthoFinder output from all 47 species
Lfl_g12875 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
MA_10282308g0010 EMB86, EMB1030, EMB263 alanine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Msp_g25185 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Nbi_g21729 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g08778 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Pir_g64933 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Pnu_g26458 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Ppi_g56809 EMB86, EMB1030, EMB263 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017335 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g26484 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Solyc01g111990.3.1 EMB86, EMB1030,... alanine-tRNA ligase 0.1 OrthoFinder output from all 47 species
Spa_g39932 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Tin_g43549 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e036036_P002 EMB86, EMB1030,... alanine-tRNA ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 765 808
IPR018164 Ala-tRNA-synth_IIc_N 107 666
IPR003156 DHHA1_dom 847 985
No external refs found!