Dde_g09974 (SECA1, AtcpSecA, AGY1)


Aliases : SECA1, AtcpSecA, AGY1

Description : component *(SecA1) of thylakoid membrane Sec1 translocation system & original description: none


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g09974

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00116920 SECA1, AtcpSecA,... Protein translocation.chloroplast.thylakoid membrane... 0.06 OrthoFinder output from all 47 species
AT4G01800 SECA1, AtcpSecA, AGY1 Albino or Glassy Yellow 1 0.03 OrthoFinder output from all 47 species
Adi_g007063 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Aob_g02321 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Aop_g13757 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Aop_g60479 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Azfi_s0155.g053632 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Cba_g17139 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Ceric.02G067600.1 SECA1, AtcpSecA,... component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.51 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cre12.g517900 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.06 OrthoFinder output from all 47 species
Dac_g06495 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Dac_g06496 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Dcu_g05773 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Ehy_g07099 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.08 OrthoFinder output from all 47 species
GSVIVT01028249001 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.07 OrthoFinder output from all 47 species
Gb_00858 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.04 OrthoFinder output from all 47 species
Gb_34931 SECA1, AtcpSecA, AGY1 component SecA1 of thylakoid membrane Sec1 translocation system 0.1 OrthoFinder output from all 47 species
LOC_Os01g21820.1 SECA1, AtcpSecA,... component SecA2 of inner envelope Sec2 post-import... 0.12 OrthoFinder output from all 47 species
Len_g36322 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Lfl_g02357 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
MA_304459g0010 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.06 OrthoFinder output from all 47 species
Mp5g09750.1 SECA1, AtcpSecA, AGY1 component SecA1 of thylakoid membrane Sec1 translocation system 0.05 OrthoFinder output from all 47 species
Msp_g23935 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.08 OrthoFinder output from all 47 species
Nbi_g15165 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.08 OrthoFinder output from all 47 species
Nbi_g30518 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.1 OrthoFinder output from all 47 species
Ore_g18515 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Pnu_g06676 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Pnu_g31499 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ppi_g14444 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016761 SECA1, AtcpSecA, AGY1 channel-forming component *(Tim23) of inner... 0.04 OrthoFinder output from all 47 species
Sam_g15982 No alias component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Sam_g28166 No alias component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Smo156007 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.04 OrthoFinder output from all 47 species
Solyc01g080840.3.1 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.09 OrthoFinder output from all 47 species
Spa_g10168 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Spa_g17299 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Zm00001e017535_P001 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR011115 SecA_DEAD 95 463
IPR011116 SecA_Wing/Scaffold 771 985
IPR011130 SecA_preprotein_X-link_dom 313 419
No external refs found!